Loading Modules into the Kernel (Notebook) environment¶

Check what modules are currently loaded in this Notebook session¶

In [1]:

!module list --no-pager

!module list --no-pager

Currently Loaded Modulefiles:
 1) miniconda3/4.8.2-gcc-8.3.1-3m7b6t2  

Put this file load_modules_into_jupyter.conf into your Home directory and your Notebook environment will have these modules loaded. It is not possible to load these modules via magic (python magic ;).

It needs the empty line at the end...

In [2]:

%%writefile ~/load_modules_into_jupyter.conf
eccodes/2.18.0-gcc-8.3.1-s7clum3

%%writefile ~/load_modules_into_jupyter.conf eccodes/2.18.0-gcc-8.3.1-s7clum3

Writing /jetfs/home/mblaschek/load_modules_into_jupyter.conf

In [3]:

!cat ~/load_modules_into_jupyter.conf

!cat ~/load_modules_into_jupyter.conf

eccodes/2.18.0-gcc-8.3.1-s7clum3

Restart the kernel and you should see that the module is loaded¶

In [1]:

!module list --no-pager

!module list --no-pager

Currently Loaded Modulefiles:
 1) miniconda3/4.8.2-gcc-8.3.1-3m7b6t2        
 2) zlib/1.2.11-gcc-8.3.1-bbbpnzp             
 3) openmpi/4.0.5-gcc-8.3.1-773ztsv           
 4) hdf5/1.12.0-gcc-8.3.1-awl4atl             
 5) parallel-netcdf/1.12.1-gcc-8.3.1-xxrhtxn  
 6) netcdf-c/4.7.4-gcc-8.3.1-fh4nn6k          
 7) eccodes/2.18.0-gcc-8.3.1-s7clum3          

Now all the dependencies are loaded as well¶