Loading Modules into the Kernel (Notebook) environment¶

Check what modules are currently loaded in this Notebook session¶

In [1]:

!module list --no-pager

!module list --no-pager

Currently Loaded Modulefiles:
 1) micromamba/2.2.0  

Put this file load_modules_into_jupyter.conf into your Home directory and your Notebook environment will have these modules loaded. It is not possible to load these modules via magic (python magic ;).

It needs the empty line at the end...

In [2]:

%%writefile ~/load_modules_into_jupyter.conf
eccodes/2.25.0-gcc-12.2.0-y2gnn47

%%writefile ~/load_modules_into_jupyter.conf eccodes/2.25.0-gcc-12.2.0-y2gnn47

Overwriting /jetfs/home/yourusername/load_modules_into_jupyter.conf

In [3]:

!cat ~/load_modules_into_jupyter.conf

!cat ~/load_modules_into_jupyter.conf

eccodes/2.25.0-gcc-12.2.0-y2gnn47

Restart the kernel and you should see that the module is loaded¶

In [1]:

!module list --no-pager

!module list --no-pager

Currently Loaded Modulefiles:
 1) micromamba/2.2.0                  4) netcdf-c/4.9.2-gcc-12.2.0-wicjkfm  
 2) mpich/4.1.2-gcc-12.2.0-mzdfzqb    5) eccodes/2.25.0-gcc-12.2.0-y2gnn47  
 3) hdf5/1.10.10-gcc-12.2.0-cnot2wb  

Now all the dependencies are loaded as well¶